Thermopriming in Crops: Building Heat Memory for Climate Resilience

As climate change reshapes global agricultural landscapes, one of the most pressing challenges faced by farmers and scientists alike is the escalating intensity and frequency of heatwaves. Crops are increasingly subjected to high-temperature stress, which can severely impair growth, reproduction, and yield. To safeguard global food production, researchers are exploring innovative physiological and molecular strategies that help plants withstand such stress. Among these, thermopriming—the process of exposing plants to a mild heat stress to prepare them for future, more intense heat episodes—is emerging as a powerful tool in climate-resilient crop management.

Thermopriming enables plants to develop a stress memory, allowing them to “recall” previous experiences and respond more efficiently to subsequent heat stress. This mechanism involves complex physiological, biochemical, molecular, and epigenetic changes that provide a sustainable way to enhance crop productivity under climate variability.

What is Thermopriming?

Thermopriming is a form of induced tolerance, where exposure to a moderate heat stimulus (typically a few degrees above the optimal growth temperature but below the damage threshold) preconditions the plant to tolerate more severe stress. Unlike short-lived acclimation responses that vanish after the stress ends, thermopriming can leave a lasting imprint on the plant’s stress response systems.

This “heat memory” can persist for days or even weeks, and in some cases, can even influence the next generation through transgenerational epigenetic inheritance. The phenomenon is part of a broader group of adaptive responses called priming, which also includes drought priming, cold priming, and salt priming. However, thermopriming is unique in its direct relevance to global warming and heat-related crop failures.

Physiological Adjustments Induced by Thermopriming

Plants rely on a series of coordinated physiological adjustments to mitigate the damage caused by heat. Thermopriming fine-tunes several of these processes:

1. Photosynthetic Efficiency

High temperatures often cause photoinhibition, where the photosynthetic machinery, especially Photosystem II (PSII), is damaged. Thermopriming preserves the structural integrity of thylakoid membranes, ensuring efficient electron transport and chlorophyll fluorescence. This helps maintain photosynthetic rates and supports continued growth even under prolonged stress.

2. Improved Water Balance

Thermoprimed plants show improved leaf relative water content (RWC) and better water use efficiency (WUE). They often exhibit deeper root growth, better access to soil moisture, and reduced stomatal aperture, which collectively help balance transpiration and CO₂ uptake. These adjustments protect cells from desiccation and maintain turgor pressure necessary for expansion.

3. Membrane Thermostability

Cell membranes are particularly vulnerable to high temperatures, leading to electrolyte leakage and metabolic disruption. Thermopriming enhances membrane stability index (MSI) by preserving lipid composition and maintaining the function of ion transport channels. This allows cells to retain solute gradients, which are vital for energy metabolism and osmoregulation.

4. Enhanced Antioxidant Activity

Heat stress accelerates the production of reactive oxygen species (ROS) such as superoxide radicals and hydrogen peroxide. Thermoprimed plants exhibit higher activity of antioxidant enzymes like SOD, CAT, and APX, as well as increased levels of non-enzymatic antioxidants like glutathione and ascorbic acid. This detoxification system prevents oxidative damage to lipids, proteins, and nucleic acids, preserving cellular integrity.

Molecular Mechanisms Behind Heat Stress Memory

The most remarkable aspect of thermopriming is the activation of a molecular memory system that allows plants to remember and respond faster to future heat encounters. This system operates through several pathways:

1. Activation of Heat Shock Factors (HSFs) and Heat Shock Proteins (HSPs)

During thermopriming, transcription factors such as HSFA1, HSFA2, and HSFA3 are activated. These factors regulate the expression of heat shock proteins like HSP70, HSP90, and HSP101, which protect cellular proteins from unfolding and aggregation under heat.

HSFA2, in particular, is critical for maintaining the expression of stress-responsive genes long after the priming stimulus has ended. This contributes to a form of molecular preparedness that enables a more robust and rapid response during future heat stress.

2. Chromatin Remodeling and Histone Modifications

Thermopriming induces epigenetic changes that facilitate the long-term expression of heat-responsive genes. For example, histone H3 lysine 4 trimethylation (H3K4me3) is enriched at the promoters of genes like HSP101 and APX2 after priming, keeping the chromatin in an open state conducive to transcription.

These marks can persist for several days, essentially “bookmarking” genes for rapid reactivation. In some cases, histone acetylation and DNA methylation changes also contribute to this primed state.

3. Non-coding RNAs and Memory Maintenance

Recent studies highlight the role of long non-coding RNAs (lncRNAs) and microRNAs (miRNAs) in regulating heat stress responses. These molecules can modulate gene expression post-transcriptionally and may play a role in maintaining stress memory, although their exact functions in thermopriming are still being uncovered.

Thermopriming in Major Crops: Case Studies

Thermopriming has been successfully applied in numerous crops, including cereals, legumes, vegetables, and fruit crops:

Wheat (Triticum aestivum)

Wheat is highly sensitive to heat during flowering and grain filling. Thermoprimed wheat shows increased spikelet fertility, greater thousand-grain weight, and better photosynthetic performance. Studies have demonstrated higher activity of SOD and CAT in thermoprimed wheat under heat stress (Liu et al., 2019).

Rice (Oryza sativa)

In rice, priming at the panicle initiation stage significantly reduces spikelet sterility and supports better pollen viability. This leads to improved grain set and yield, especially under conditions of terminal heat stress.

Maize (Zea mays)

Maize exhibits better membrane integrity and chlorophyll stability after thermopriming. Field studies have shown that primed plants perform better in terms of biomass accumulation and grain yield under sudden temperature spikes.

Tomato (Solanum lycopersicum)

In tomato, thermopriming enhances fruit set, fruit quality, and lycopene content. The effects are associated with increased expression of HSPs and improved stomatal conductance under high temperatures.

Opportunities and Challenges in Agricultural Application

Opportunities

Eco-friendly and non-transgenic: Thermopriming does not require genetic modification and is aligned with organic and sustainable agriculture goals. Scalable potential: Thermopriming through seed treatment, foliar application of signaling molecules, or controlled heat treatments can be integrated into existing farming practices. Synergy with breeding: By identifying thermopriming-responsive genotypes, breeders can develop cultivars with enhanced responsiveness and longer-lasting stress memory.

Challenges

Genotype dependency: Not all cultivars respond equally to priming; breeding for priming responsiveness remains a key challenge. Duration and stability: The priming effect can be short-lived in some species, requiring repeated application or integration with epigenetic tools. Field standardization: Implementing thermopriming under open field conditions requires precise control over temperature and timing, which may not be feasible for all regions or crops.

Future Prospects

As climate variability increases, thermopriming may be integrated with modern tools such as:

CRISPR-based gene editing to engineer long-lasting stress memory. High-throughput phenotyping platforms to screen large numbers of genotypes for priming efficiency. Smart agriculture sensors and IoT for automated heat priming applications based on weather forecasting.

Moreover, combination priming—where heat priming is combined with drought or salinity priming—can provide multi-stress resistance, making crops resilient to complex environmental stress patterns.

Conclusion

Thermopriming is not just a biological curiosity—it is a strategic tool for climate-smart agriculture. By helping crops remember and resist high temperatures, thermopriming bridges the gap between stress exposure and sustainable productivity. It leverages the remarkable plasticity of plant systems to adapt, survive, and even thrive in a warming world.

As research continues to uncover the underlying mechanisms and optimize application strategies, thermopriming is poised to become a cornerstone of future agronomic practices—where memory meets sustainability in the fight against heat.

References

Crisp, P. A., Ganguly, D., Eichten, S. R., Borevitz, J. O., & Pogson, B. J. (2016). Reconsidering plant memory: Intersections between stress recovery, RNA turnover, and epigenetics. Science Advances, 2(2), e1501340. https://doi.org/10.1126/sciadv.1501340 Lamke, J., & Bäurle, I. (2017). Epigenetic and chromatin-based mechanisms in environmental stress adaptation and stress memory in plants. Genome Biology, 18, 124. https://doi.org/10.1186/s13059-017-1263-6 Larkindale, J., & Vierling, E. (2008). Core responses to plant stress: Conserved and specialized signaling mechanisms of response and adaptation to stress. Plant Physiology, 146(3), 748–754. https://doi.org/10.1104/pp.107.112706 Liu, H., Li, M., Li, Y., Wang, Q., & Li, Y. (2019). Priming with heat shock enhances heat tolerance of wheat seedlings by regulating the antioxidant system. Acta Physiologiae Plantarum, 41(6), 85. https://doi.org/10.1007/s11738-019-2897-9

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